smpgd2018 : Statistical Methods for Post Genomic Data
11-12 Jan 2018 Montpellier (France)
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Planning
Week
Thu. 11
Fri. 12
List
Thursday, January 11, 2018
›
09:00
10:00
11:00
12:00
13:00
14:00
15:00
16:00
17:00
18:00
19:00
›9:15 (15min)
Welcome address
Commité d'organisation
9:15 - 9:30 (15min)
Welcome address
Commité d'organisation
›9:30 (1h)
Keynote 1: Lluis Quintana Murci
9:30 - 10:30 (1h)
Keynote 1: Lluis Quintana Murci
›
Evolutionary genetic dissection of the genus Homo and its immune response
- lluis Quintana Murci, 1Unit of Human Evolutionary Genetics, Institut Pasteur, Paris, France; 2CNRS URA3012, Paris, France.
09:30-10:30 (1h)
›10:30 (20min)
Coffee break
10:30 - 10:50 (20min)
Coffee break
›10:50 (1h30)
Evolutionary models and Bayesian Inference
Pierre Pudlo
10:50 - 12:20 (1h30)
Evolutionary models and Bayesian Inference
Pierre Pudlo
›
Combining relaxed clocks with gene transfers to date species trees
- Bastien Boussau, Laboratoire de Biométrie et Biologie Evolutive
10:50-11:20 (30min)
›
Improved estimators of the population recombination rata
- Andreas Futschik, Johannes Kepler Universität Linz
11:20-11:50 (30min)
›
Inferring the genomic variation in introgression rates
- Camille Roux, Université de Lille
11:50-12:20 (30min)
›12:20 (1h30)
Lunch
12:20 - 13:50 (1h30)
Lunch
›13:50 (1h)
Contributed
Pierre Pudlo
› Amphi
13:50 - 14:50 (1h)
Contributed
Amphi
Pierre Pudlo
›
Estimation of Fst and tree inference under hierarchical population structure
- Tristan Mary-Huard, Institut national de la recherche agronomique [Paris-siège]
13:50-14:10 (20min)
›
Model choice using Approximate Bayesian Computation via random forests: analyzes based on model grouping to make inferences about the genetic history of Pygmy human populations
- Jean-Michel Marin, IMAG
14:10-14:30 (20min)
›
ABC random forests for Bayesian parameter inference
- Louis Raynal, Institut Montpelliérain Alexander Grothendieck
14:30-14:50 (20min)
›14:50 (1h)
Keynote 2: Ruth Heller
14:50 - 15:50 (1h)
Keynote 2: Ruth Heller
›
Estimation and testing following aggregated association tests
- Ruth Heller, Tel Aviv University
14:50-15:50 (1h)
›15:50 (20min)
Coffee break
15:50 - 16:10 (20min)
Coffee break
›16:10 (1h20)
Contributed
› Amphi
16:10 - 17:30 (1h20)
Contributed
Amphi
›
Modeling Spatial Genomic Interactions with the Hawkes model
- Anna Bonnet, Laboratoire de Biométrie et Biologie Evolutive
16:10-16:30 (20min)
›
From kmers to genetic events: compacted De Bruijn graphs shed light on bacterial GWAS
- Magali Jaillard Dancette, bioMérieux, Laboratoire de Biométrie et Biologie Evolutive UMR5558
16:30-16:50 (20min)
›
Multiple kernel learning for integrative clustering in genomic precision medicine
- Alessandra Cabassi, MRC Biostatistics Unit, University of Cambridge
16:50-17:10 (20min)
›
Gene-specific identification of spatial associations between epigenomic marks
- Gabriele Schweikert, University of Edinburgh
17:10-17:30 (20min)
›17:30 (2h)
poster session and cocktail
17:30 - 19:30 (2h)
poster session and cocktail
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