Planning

Week Thu. 11 Fri. 12 List

	Thu. 11	Fri. 12
09:00 10:00 11:00 12:00 13:00 14:00 15:00 16:00 17:00 18:00 19:00	Welcome address 9:15 - 9:30 (15min) Welcome address Commité d'organisation Keynote 1: Lluis Quintana Murci 9:30 - 10:30 (1h) Keynote 1: Lluis Quintana Murci › Evolutionary genetic dissection of the genus Homo and its immune response - lluis Quintana Murci, 1Unit of Human Evolutionary Genetics, Institut Pasteur, Paris, France; 2CNRS URA3012, Paris, France. 09:30-10:30 (1h) Coffee break 10:30 - 10:50 (20min) Coffee break Evolutionary models and Bayesian Inference 10:50 - 12:20 (1h30) Evolutionary models and Bayesian Inference Pierre Pudlo › Combining relaxed clocks with gene transfers to date species trees - Bastien Boussau, Laboratoire de Biométrie et Biologie Evolutive 10:50-11:20 (30min) › Improved estimators of the population recombination rata - Andreas Futschik, Johannes Kepler Universität Linz 11:20-11:50 (30min) › Inferring the genomic variation in introgression rates - Camille Roux, Université de Lille 11:50-12:20 (30min) Lunch 12:20 - 13:50 (1h30) Lunch Contributed 13:50 - 14:50 (1h) Contributed Amphi Pierre Pudlo › Estimation of Fst and tree inference under hierarchical population structure - Tristan Mary-Huard, Institut national de la recherche agronomique [Paris-siège] 13:50-14:10 (20min) › Model choice using Approximate Bayesian Computation via random forests: analyzes based on model grouping to make inferences about the genetic history of Pygmy human populations - Jean-Michel Marin, IMAG 14:10-14:30 (20min) › ABC random forests for Bayesian parameter inference - Louis Raynal, Institut Montpelliérain Alexander Grothendieck 14:30-14:50 (20min) Keynote 2: Ruth Heller 14:50 - 15:50 (1h) Keynote 2: Ruth Heller › Estimation and testing following aggregated association tests - Ruth Heller, Tel Aviv University 14:50-15:50 (1h) Coffee break 15:50 - 16:10 (20min) Coffee break Contributed 16:10 - 17:30 (1h20) Contributed Amphi › Modeling Spatial Genomic Interactions with the Hawkes model - Anna Bonnet, Laboratoire de Biométrie et Biologie Evolutive 16:10-16:30 (20min) › From kmers to genetic events: compacted De Bruijn graphs shed light on bacterial GWAS - Magali Jaillard Dancette, bioMérieux, Laboratoire de Biométrie et Biologie Evolutive UMR5558 16:30-16:50 (20min) › Multiple kernel learning for integrative clustering in genomic precision medicine - Alessandra Cabassi, MRC Biostatistics Unit, University of Cambridge 16:50-17:10 (20min) › Gene-specific identification of spatial associations between epigenomic marks - Gabriele Schweikert, University of Edinburgh 17:10-17:30 (20min) poster session and cocktail 17:30 - 19:30 (2h) poster session and cocktail	Keynote 3: Elizabeth Purdom 9:00 - 10:00 (1h) Keynote 3: Elizabeth Purdom Amphi › Estimation of lineage trajectories from single cell mRNA data - Elizabeth Purdom, UC Berkeley 09:00-10:00 (1h) Single-cell 10:00 - 10:30 (30min) Single-cell › Gene network inference using single-cell data: from mechanistic modelling to statistics - Ulysse Herbach, Laboratoire de Biologie et Modélisation de la Cellule, Inria team DRACULA, Institut Camille Jordan 10:00-10:30 (30min) Coffee break 10:30 - 10:50 (20min) Coffee break Single-Cell / Contributed 10:50 - 12:10 (1h20) Single-Cell / Contributed Amphi › Splicing analysis in single-cell RNA-seq - Guido Sanguinetti, University of Edinburgh 10:50-11:20 (30min) › Information theoretic approaches to single cell gene regulatory network inference - Thalia Chan, Imperial College 11:20-11:50 (30min) › Variational Inference for Probabilistic Poisson PCA - Stéphane Robin, MIA-Paris 11:50-12:10 (20min) Lunch 12:10 - 13:50 (1h40) Lunch Keynote 4: Peter Mueller 13:50 - 14:50 (1h) Keynote 4: Peter Mueller Amphi › The future of Bayesian clinical trial design - Peter Mueller, UT Austin Dpt of Statistics and Data Sc 13:50-14:50 (1h) Non parametric Bayes and health 14:50 - 15:50 (1h) Non parametric Bayes and health Alice Cleynen › A Bayesian Nonparametric Approach to Ecological Risk Assessment - Julyan Arbel 14:50-15:20 (30min) › Modeling population structure under hierarchical Dirichlet processes - Lloyd Elliott, Oxford University 15:20-15:50 (30min) Coffee break 15:50 - 16:10 (20min) Coffee break Contributed 16:10 - 17:10 (1h) Contributed Amphi Alice Cleynen › Computing competing risks based on family history in genetic disease with variable age at onset - Alexandra Lefebvre, Laboratoire de Probabilité et Modèles Aléatoires 16:10-16:30 (20min) › Variable selection in multivariate linear models with high-dimensional covariance matrix estimation - Marie Perrot-Dockès, UMR MIA-Paris 16:30-16:50 (20min) › Multiway high-dimensional lasso-penalized analysis with imputation of missing data applied to postgenomic data in an Ebola vaccine trial - Hadrien Lorenzo 16:50-17:10 (20min)

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