Thursday, January 11, 2018

Time Event  
09:15 - 09:30 Welcome address - Commité d'organisation  
09:30 - 10:30 Keynote 1: Lluis Quintana Murci  
09:30 - 10:30 › Evolutionary genetic dissection of the genus Homo and its immune response - lluis Quintana Murci, 1Unit of Human Evolutionary Genetics, Institut Pasteur, Paris, France; 2CNRS URA3012, Paris, France.  
10:30 - 10:50 Coffee break  
10:50 - 12:20 Evolutionary models and Bayesian Inference - Pierre Pudlo  
10:50 - 11:20 › Combining relaxed clocks with gene transfers to date species trees - Bastien Boussau, Laboratoire de Biométrie et Biologie Evolutive  
11:20 - 11:50 › Improved estimators of the population recombination rata - Andreas Futschik, Johannes Kepler Universität Linz  
11:50 - 12:20 › Inferring the genomic variation in introgression rates - Camille Roux, Université de Lille  
12:20 - 13:50 Lunch  
13:50 - 14:50 Contributed (Amphi) - Pierre Pudlo  
13:50 - 14:10 › Estimation of Fst and tree inference under hierarchical population structure - Tristan Mary-Huard, Institut national de la recherche agronomique [Paris-siège]  
14:10 - 14:30 › Model choice using Approximate Bayesian Computation via random forests: analyzes based on model grouping to make inferences about the genetic history of Pygmy human populations - Jean-Michel Marin, IMAG  
14:30 - 14:50 › ABC random forests for Bayesian parameter inference - Louis Raynal, Institut Montpelliérain Alexander Grothendieck  
14:50 - 15:50 Keynote 2: Ruth Heller  
14:50 - 15:50 › Estimation and testing following aggregated association tests - Ruth Heller, Tel Aviv University  
15:50 - 16:10 Coffee break  
16:10 - 17:30 Contributed (Amphi)  
16:10 - 16:30 › Modeling Spatial Genomic Interactions with the Hawkes model - Anna Bonnet, Laboratoire de Biométrie et Biologie Evolutive  
16:30 - 16:50 › From kmers to genetic events: compacted De Bruijn graphs shed light on bacterial GWAS - Magali Jaillard Dancette, bioMérieux, Laboratoire de Biométrie et Biologie Evolutive UMR5558  
16:50 - 17:10 › Multiple kernel learning for integrative clustering in genomic precision medicine - Alessandra Cabassi, MRC Biostatistics Unit, University of Cambridge  
17:10 - 17:30 › Gene-specific identification of spatial associations between epigenomic marks - Gabriele Schweikert, University of Edinburgh  
17:30 - 19:30 poster session and cocktail  

Friday, January 12, 2018

Time Event  
09:00 - 10:00 Keynote 3: Elizabeth Purdom (Amphi)  
09:00 - 10:00 › Estimation of lineage trajectories from single cell mRNA data - Elizabeth Purdom, UC Berkeley  
10:00 - 10:30 Single-cell  
10:00 - 10:30 › Gene network inference using single-cell data: from mechanistic modelling to statistics - Ulysse Herbach, Laboratoire de Biologie et Modélisation de la Cellule, Inria team DRACULA, Institut Camille Jordan  
10:30 - 10:50 Coffee break  
10:50 - 12:10 Single-Cell / Contributed (Amphi)  
10:50 - 11:20 › Splicing analysis in single-cell RNA-seq - Guido Sanguinetti, University of Edinburgh  
11:20 - 11:50 › Information theoretic approaches to single cell gene regulatory network inference - Thalia Chan, Imperial College  
11:50 - 12:10 › Variational Inference for Probabilistic Poisson PCA - Stéphane Robin, MIA-Paris  
12:10 - 13:50 Lunch  
13:50 - 14:50 Keynote 4: Peter Mueller (Amphi)  
13:50 - 14:50 › The future of Bayesian clinical trial design - Peter Mueller, UT Austin Dpt of Statistics and Data Sc  
14:50 - 15:50 Non parametric Bayes and health - Alice Cleynen  
14:50 - 15:20 › A Bayesian Nonparametric Approach to Ecological Risk Assessment - Julyan Arbel  
15:20 - 15:50 › Modeling population structure under hierarchical Dirichlet processes - Lloyd Elliott, Oxford University  
15:50 - 16:10 Coffee break  
16:10 - 17:10 Contributed (Amphi) - Alice Cleynen  
16:10 - 16:30 › Computing competing risks based on family history in genetic disease with variable age at onset - Alexandra Lefebvre, Laboratoire de Probabilité et Modèles Aléatoires  
16:30 - 16:50 › Variable selection in multivariate linear models with high-dimensional covariance matrix estimation - Marie Perrot-Dockès, UMR MIA-Paris  
16:50 - 17:10 › Multiway high-dimensional lasso-penalized analysis with imputation of missing data applied to postgenomic data in an Ebola vaccine trial - Hadrien Lorenzo